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Table 1 Specificity of siRNA target prediction
| shRNA (passenger) | Target | Reference | Target predicted by the SPICEa |
|---|---|---|---|
| GAUUAUCCAAAGAGGUUCU | RPS6KA6 | Berns et al. [2] | RPS6KA6 (1, 0) |
| UGGUUGAUGAGCCAAUGGA | RPS6KA6 | Berns et al. [2] | RPS6KA6 (1, 0) |
| GUACGGCCGUAGUCUCAAG | HTATIP | Berns et al. [2] | KAT5 (1, 0): identical to HTATIP |
| CAAACGUCUGGAUGAAUGG | HTATIP | Berns et al. [2] | KAT5 (1, 0): identical to HTATIP |
| GCCAUCCAGAUGGACUUUC | HDAC4 | Berns et al. [2] | HDAC4 (1, 0) |
| GCAUGUGUUUCUGCCUUGC | HDAC4 | Berns et al. [2] | HDAC4 (1, 0) |
| GCAGCAGAGGUGAUUCUGC | CCT2 | Berns et al. [2] | CCT2 (1, 0) |
| GAGAGGCGCUGUUGAGUUC | CCT2 | Berns et al. [2] | CCT2 (1, 0) |
| GAGUACAUUCUGCCUUGCU | KIAA0828 | Berns et al. [2] | AHCYL2 (1, 0): identical to KIAA0828 |
| GCUACAUCAAGAACUCAGC | KIAA0828 | Berns et al. [2] | AHCYL2 (1, 0): identical to KIAA0828 |
| GAGACCTACCTCCGGATCA | PLK1 | Jackson et al. [16] | PLK1 (1, 0) |
