Table 3 The contingency between the individual genes and subnetworks identified on two independent psoriasis datasets
From: MOBAS: identification of disease-associated protein subnetworks using modularity-based scoring
(a) | Significant in WTCCC | Not Significant in WTCCC | |
|---|---|---|---|
Significant in GAIN | 11 | 1 | |
Not significant in GAIN | 28 | 2927 | |
(b) | In significant WTCCC subnetwork | Not in significant WTCCC subnetwork | |
Significant in GAIN | 2 | 10 | |
Not significant in GAIN | 13 | 2942 | |
(c) | Significant in WTCCC | Not Significant in WTCCC | |
In significant GAIN subnetwork | 6 | 15 | |
Not in significant GAIN subnetwork | 33 | 2913 | |
(d) | In significant WTCCC subnetwork | Not in significant WTCCC subnetwork | |
In significant GAIN subnetwork | 13 | 8 | |
Not in significant GAIN subnetwork | 2 | 2944 |