Skip to main content

Advertisement

Table 4 Comparison of network-based analysis approaches considering output information

From: Analysis of miRNA, mRNA, and TF interactions through network-based methods

Tool Kind Format Link to external knowledge bases
dChip-GemiNi [42] Statistics of association. Visualization of network Static Not available
MAGIA 2[44] Statistics of association. Visualization of network Dynamic and exportable in Cytoscape Available
mirConnX [47] Statistics of association. Visualization of network Dynamic Available
IntegraMiR [54] Lists of associated mRNA-miRNA and TF Static Not available