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EURASIP Journal on Bioinformatics and Systems Biology
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Figure 2 | EURASIP Journal on Bioinformatics and Systems Biology

Figure 2

From: Using the minimum description length principle to reduce the rate of false positives of best-fit algorithms

Figure 2

Simplified cell-cycle network of budding yeast and the inferred networks from time-series in Table 2. (A) Simplified cell-cycle network of budding yeast. Arrows are positive regulation, “T” lines are negative regulation, “T” loops are self-degradation. (B) Network inferred by MDL. (C) Network inferred by best-fit-I. (D) Network inferred by best-fit-II. (E) Network inferred by best-fit-I filtered by CMI. (F) Network inferred by best-fit-II filtered by CMI. (G) Network inferred by best-fit-I filtered by MDL. (H) Network inferred by best-fit-II filtered by MDL. From panel (B) to (H), the bold solid lines are the correctly inferred regulatory relations, while the light dashed lines are the incorrectly inferred regulatory relations.

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