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Table 3 Timing results

From: A sequential Monte Carlo framework for haplotype inference in CNV/SNP genotype data

 

Number of markers

 

30

50

100

TDSCNV

2.1

3.7

5.7

polyHap (v2.0)

262.3

431.5

892.1

  1. For each method and each marker size, the computational time is the average time on the 100 datasets used in the switch error rate calculation. Time is given in seconds.