Gene regulatory network inference by point-based Gaussian approximation filters incorporating the prior information

EURASIP Journal on Bioinformatics and Systems Biology

Table 2 Comparison of different filters

		True positives #			False positives #			True negatives #			False negatives #
Filters	Min	Max	Avg	Min	Max	Avg	Min	Max	Avg	Min	Max	Avg
EKF	2	17	10.60	23	44	36.4	2	15	7.08	2	24	9.92
UKF	25	29	26.80	16	26	19.28	8	16	13.06	2	8	4.86
CKF₃	25	30	26.74	16	26	19.10	8	15	13.14	2	8	5.02
CKF₅	25	29	26.64	16	26	19.24	8	16	13.08	1	8	5.04
	True positive rate						False positive rate			Positive predictive rate
Filters	Min		Max		Avg		Min	Max	Avg	Min	Max	Avg
EKF	0.0769		0.8667		0.5224		0.6053	0.9545	0.8358	0.0800	0.3208	0.2231
UKF	0.7576		0.9355		0.8472		0.5	0.7576	0.5955	0.5094	0.6279	0.5824
CKF₃	0.7576		0.9375		0.8426		0.5161	0.7647	0.5918	0.5094	0.6364	0.5840
CKF₅	0.7576		0.9667		0.8417		0.5000	0.7647	0.5946	0.5094	0.6279	0.5814