Skip to main content
Figure 1 | EURASIP Journal on Bioinformatics and Systems Biology

Figure 1

From: Phase computations and phase models for discrete molecular oscillators

Figure 1

Summary of molecular models and corresponding algorithms. The models, their natures, and the simulation algorithms for these models are given. CME (of discrete stochastic nature) dictates the probability evolution of the ensemble of the sample paths generated by the SSA algorithm. Applying to the CME the Ï„-leap criterion and Gaussian approximation to Poisson random variables, CLE (continuous stochastic) is derived. CLE sample paths are obtained via appropriate SDE Solutions. The infinite volume approximation acting on the CLE leads us to the RRE (continuous deterministic), whose solutions we get through algorithms for ODEs.

Back to article page