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EURASIP Journal on Bioinformatics and Systems Biology

Table 1 P53 pathways, with GS size (), unadjusted and FDR adjusted -values ()

From: A Hypothesis Test for Equality of Bayesian Network Models

Pathway

Sub

Efr

Liu

SA_G1_AND_S_PHASES

14

.001

.08

n

y

n

atmPathway

19

.001

.08

n

n

y

g2Pathway

23

.001

.08

n

n

n

p53Pathway

16

.001

.08

y

y

y

cell_cycle_checkpointII

10

.001

.08

n

n

n

SA_FAS_SIGNALLING

9

.002

.14

n

n*

n*

cellcyclePathway

23

.002

.16

n

n*

n*

DNA_

90

.003

.17

n

n*

n*

SA_TRKA_RECEPTOR

16

.003

.17

n

n*

y*

radiation_sensitivity

26

.003

.17

y

y*

y*

ngfPathway

19

.004

.17

n

y*

n*

GO_ROS

23

.004

.17

n

n*

n*

etsPathway

16

.004

.17

n

n*

n*

ck1Pathway

15

.006

.21

n

n*

n*

erkPathway

29

.007

.23

n

n*

n*

18

.007

.23

n

n*

n*

arfPathway

13

.007

.23

n

n*

n*

  1. Inclusion in analyses cited in Section 5.1 indicated. The complete name of DNA_DAMAGE is DNA_DAMAGE_SIGNALLING. The complete name of MAP00562 is MAP00562_Inositol_phosphate_metabolism. *Inclusion criterion based on control rate of original analysis.
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