Method label | Null model | Colored edges | SSS | Currency metabolites | Enzymatic regulation | Result section | Method section |
---|
A | ER | No | Prill | Present | No | 3.1 | — |
B | Switching | No | Prill | Present | No | 3.2 | 2.6 |
C | Switching | Yes | Prill | Present | No | 3.3 | 2.7 |
D | Switching | Yes | BRENDA | Present | No | 3.4 | 2.8 |
E | Switching | Yes | BRENDA | Removed | No | 3.5 | 2.9 |
F | Switching | Yes | BRENDA | Removed | Yes | 3.6 | 2.10 |
- The "method label" is used throughout the paper for reference. The "null model" indicates the type of network model (i.e., topology) used to generate random networks in the enrichment analysis (see Section 2.6). SSS is the structural stability score (see Section 2.5). "Currency metabolites" indicates whether these metabolites have been considered in the motif count (see Section 2.9). "Enzymatic regulation" indicates whether the actual enzymatic reactions activity has been taken into account (see Section 2.10). Finally, "result section" and "method section" list the sections in which the method is first described.