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Table 2 Basic properties of the RNA families used in the experiments

From: Efficient Alignment of RNAs with Pseudoknots Using Sequence Alignment Constraints

 

Number of seed sequences

Average length

Average percentage identity

Transfer RNA

1088

72.7

45

5S ribosomal RNA

602

116.8

61

Corona_pk3

14

62.5

70

HDV_ribozyme

15

88.8

95

Tombus_3_IV

18

64.5

94

Flavi_pk3

14

95.4

69