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Table 1 The combinations of PMT and LP used to obtain multiple scans for array and array .

From: Bayesian Hierarchical Model for Estimating Gene Expression Intensity Using Multiple Scanned Microarrays

Array Scanner settings used for Cy3 (Cy5)
  PMT Gain Scan-1 (LP) Scan-2 (LP) Scan-3 (LP)
85 (98) 100 (100) 90 (90) 80 (80)
74 (85) 98 (100) 88 (90) 78 (80)