Table 2 Discretization thresholds for different types of measures
From: Reverse Engineering of Gene Regulatory Networks: A Comparative Study
Application | Threshold |
|
|
|---|---|---|---|
GNRevealer (neural network) [NN] |
|
|
|
GeneNet (graphical Gaussian model) [GGM] | — | 0.02 |
|
Partial Pearson correlation, 0th order [PC0] | — |
|
|
Partial Pearson correlation, 1st order [PC1] | — |
|
|
Partial Pearson correlation, 2nd order [PC2] | — |
|
|
Partial Pearson correlation, 3rd order [PC3] | — |
|
|
Partial Spearman correlation, 0th order [SC0] | — |
|
|
Partial Spearman correlation, 1st order [SC1] | — |
|
|
Partial Spearman correlation, 2nd order [SC2] | — |
|
|
